In comparison to leukemias, the clinical relevance of chromosomal aber
rations in non-Hodgkin's lymphoma (NHL) is not as well understood. Thi
s is primarily due to limitations of chromosomal banding techniques wh
ich have been the central methods for cytogenetic analysis. These tech
niques depend on the availability of fresh tumor tissue and the examin
ation of metaphase cells which may not be representative for the major
cell clone in vivo. In contrast, the new technique of comparative gen
omic hybridization (CGH) allows researchers to obtain a comprehensive
view of chromosomal gains and losses by analyzing tumor DNA, which can
be prepared from archival tissue samples. Results of CGH studies in t
hree different types of lymphoproliferative disorders are outlined in
this paper demonstrating that: (1) in chronic B cell leukemias, chromo
somal aberrations are missed by banding analysis in a high proportion
of cases, (2) CGH on paraffin-embedded tissue samples can be used for
cytogenetic analysis within clinical multicenter trials and (3) DNA am
plifications are more frequent in NHL than previously assumed, Thus, i
t can be expected that CGH will contribute both to the understanding o
f pathogenetic mechanisms and the identification of clinically relevan
t chromosome aberrations in NHL.