W. Paciorek et al., MOLECULAR-GEOMETRY OF INCOMMENSURATE STRUCTURES, Acta crystallographica. Section A, Foundations of crystallography, 52, 1996, pp. 349-364
Molecular-geometry calculations in the superspace framework of incomme
nsurate structure analysis are presented in detail. In particular, a m
ethod is described for attaching atoms to groups of others without the
necessity of introducing further modulation functions. Modified struc
ture-factor expressions are derived to simplify the application of con
straints to modulation functions by introducing internal coordinate re
ference points in a more general way. The consequences of such changes
are discussed. The results can be useful to improve the existing algo
rithms for incommensurate structure refinement and the analysis and pr
esentation of results, especially for recently discovered incommensura
te structures of large organic molecules. Some ambiguities still exist
ing in the superspace approach related to molecular geometry are clari
fied. The results may also be useful for the compilation of a database
describing incommensurate structures.