DETERMINATION OF CHANNEL OPEN PROBABILITIES FROM MULTICHANNEL DATA

Citation
Rj. Bauer et al., DETERMINATION OF CHANNEL OPEN PROBABILITIES FROM MULTICHANNEL DATA, Journal of neuroscience methods, 68(1), 1996, pp. 101-111
Citations number
26
Categorie Soggetti
Neurosciences
ISSN journal
01650270
Volume
68
Issue
1
Year of publication
1996
Pages
101 - 111
Database
ISI
SICI code
0165-0270(1996)68:1<101:DOCOPF>2.0.ZU;2-S
Abstract
We developed a method for determining whether channels in a multichann el patch or bilayer have the same or statistically significantly diffe rent open probabilities. We use a maximum likelihood method to fit the distribution of (unbinned) current amplitudes and to provide estimate s of individual channel open probabilities, single channel currents, a nd standard deviations of the channel currents. These parameters are u sed to compare models with increasing constraints on the open probabil ities including the model where all channels have different open proba bilities and the model where all channels have the same open probabili ty. A chi(2) statistic is used to identify models that are statistical ly less likely to predict the data. The ability of multichannel data t o determine individual open probabilities is limited by two factors: t he signal to noise ratio of the record and the fact that changes in am plitude distributions caused by a 0.2 difference in open probabilities are comparable in magnitude to the variations caused by random channe l gating. These limitations notwithstanding, we demonstrate the utilit y of our approach by using it to analyze the open probabilities of 3 l arge conductance Ca2+-activated K+ channels in an artificial lipid bil ayer revealing the response of one of those channels to GTP gamma S.