Various molecular methods are now used to map the chicken genome, incl
uding chromosome scraping, flow cytofluorimetry, zonal centrifugation,
construction of chromosome-specific libraries, genetic analysis with
polymorphic DNA markers, and in situ hybridization. Two main drawbacks
are characteristic of existing maps of chicken chromosomes. First, cl
assic genetic maps (i.e., linkage groups of genes for morphological, p
hysiological, and biochemical characters), physical maps of chromosome
s, and new genetic maps constructed on the basis of polymorphic DNA ma
rkers (RFLP, RAPD, VNTR, SSR, and CR1-PCR) do not coordinate with one
another. Second, a relatively low number of genes is present in classi
c genetic maps and physical chromosome maps. Application of cytogeneti
c methods to chromosome mapping in birds is limited because of some sp
ecific features characteristic of the organization of avian genomes. F
or the same reason, studying the location and expression of avian gene
s is very important. Since mammalian and avian genomes differ in struc
ture, revealing their possible common functional characteristics will
provide for a better understanding of the general mechanisms that cont
rol biologically important characters in higher animals.