EXTRACTION OF MOLECULAR EDGES ON THE AVERAGE DIFFERENCE MAP BY A MONTE-CARLO METHOD

Citation
Qp. Xu et al., EXTRACTION OF MOLECULAR EDGES ON THE AVERAGE DIFFERENCE MAP BY A MONTE-CARLO METHOD, Acta crystallographica. Section D, Biological crystallography, 52, 1996, pp. 909-915
Citations number
23
Categorie Soggetti
Crystallography,"Biochemical Research Methods",Biology
ISSN journal
09074449
Volume
52
Year of publication
1996
Part
5
Pages
909 - 915
Database
ISI
SICI code
0907-4449(1996)52:<909:EOMEOT>2.0.ZU;2-0
Abstract
A method giving a low-resolution image of the molecules in the unit ce ll has been described, which was based only on the observed structure factors. An operator, called the average difference operator (ADO), wa s introduced in reciprocal space to flatten the electron densities eve rywhere but the regions on either side of the molecular envelope in re al space. The observed structure factors were first modified by ADO, t hen a Monte-Carlo condensing protocol [Subbiah (1991). Science, 252, 1 28-133; (1993). Acta Cryst. D49, 108-119] was employed to stimulate th e modified electron-density map at low resolution. It was found that m olecular edges could be extracted, especially when there was relativel y large solvent content in the unit cell.