Aa. Arzumanov et al., GAMMA-PHOSPHATE-SUBSTITUTED 2'-DEOXYNUCLEOSIDE 5'-TRIPHOSPHATES AS SUBSTRATES FOR DNA-POLYMERASES, The Journal of biological chemistry, 271(40), 1996, pp. 24389-24394
Several 2'-deoxythymidine 5'-triphosphate and 3'-azido-2',3'-dideoxyth
ymidine 5'-triphosphate analogs containing a hydrophobic phosphonate g
roup instead of the gamma-phosphate were synthesized and evaluated as
substrates for human immunodeficiency virus (HIV) and avian myeloblast
osis virus reverse transcriptases, human placental DNA polymerases alp
ha and beta, and calf thymus terminal deoxynucleotidyl transferase. Th
ey were efficiently incorporated into the DNA chain by the retroviral
enzymes but were not utilized by the mammalian ones. Also, some gamma-
ester and gamma-amide derivatives of dTTP and 3'-azido-2',3'-dideoxyth
ymidine 5'-triphosphate (AZTTP) were synthesized and studied. They pro
ved to be substrates for both the retroviral and mammalian enzymes und
er study. The K-m values for incorporation of the dTTP derivatives int
o the DNA chain were close to those for dTTP and AZTTP. The K-m for th
e AZTTP derivatives were one order of magnitude greater than those for
dTTP and AZTTP. The results obtained indicate that HIV and avian myel
oblastosis virus reverse transcriptases have no sterical obstacles for
binding the triphosphate fragment bearing a bulky substituent at the
gamma-position. Modification of the gamma-phosphate in AZTTP increased
the selectivity of HIV reverse transcriptase inhibition versus DNA po
lymerase alpha. gamma-Methylphosphonate and gamma-phenylphosphonate we
re dephosphorylated in human serum much less rapidly than AZTTP. Besid
es, they were shown to be markedly more hydrophobic than AZTTP. Thus,
replacement of the gamma-phosphate in AZTTP with gamma-phosphonate mar
kedly alters its substrate properties toward some cellular DNA polymer
ases and blood dephosphorylating enzymes but does not change its subst
rate activity with respect to HIV reverse transcriptase.