WWW-QUERY - AN ONLINE RETRIEVAL-SYSTEM FOR BIOLOGICAL SEQUENCE BANKS

Authors
Citation
G. Perriere et M. Gouy, WWW-QUERY - AN ONLINE RETRIEVAL-SYSTEM FOR BIOLOGICAL SEQUENCE BANKS, Biochimie, 78(5), 1996, pp. 364-369
Citations number
33
Categorie Soggetti
Biology
Journal title
ISSN journal
03009084
Volume
78
Issue
5
Year of publication
1996
Pages
364 - 369
Database
ISI
SICI code
0300-9084(1996)78:5<364:W-AORF>2.0.ZU;2-0
Abstract
We have developed a World Wide Web (WWW) version of the sequence retri eval system Query: WWW-Query. This server allows to query nucleotide s equence banks in the EMBL/GenBank/DDBJ formats and protein sequence ba nks in the NBRF/PIR format. WWW-Query includes all the features of the on-line sequence browsers already available: possibility to build com plex queries, integration of cross-references with different data bank s, and access to the functional zones of biological interest. It also provides original services not available elsewhere: introduction of th e notion of re-usable sequence lists, integration of dedicated helper applications for visualizing alignments and phylogenetic trees and lin ks with multivariate methods for studying codon usage or for complemen ting phylogenies.