Macrobicycle 12 has been synthesized and its binding properties with a
range of N-acetyl amino acid carboxylates (as tetrabutylammonium salt
s) have been studied. While the binding results showed little selectiv
ity for the various substrates investigated, detailed NMR studies have
revealed that D-amino acid substrates bind predominantly on the outsi
de of the macrobicycle cavity by a strong carboxylate-thiourea interac
tion, whereas L-amino acid substrates bind predominantly on the inside
of the cavity also establishing a strong carboxylate-thiourea interac
tion but with the acetyl amide in a cis configuration. Molecular model
ing studies suggest that the energetic penalty associated with adoptin
g a cis amide configuration in the host-guest complex is compensated b
y intermolecular hydrogen bonds between the cis amide and the rim of t
he macrobicycle.