We have developed a method that allows, for the first time, a specific
analysis of the inactive X chromosome (Xi) in interphase cells. By co
mbining immunolabeling of acetylated histone H4 with specific antisera
and FISH with an X-chromosome centromere-specific DNA probe, micronuc
leated whole Xis in human female cells may be identified by their lack
of histone H4 acetylation. As one example of the potential applicatio
ns of this methodology in genetic studies in humans, an artifact-free
X-chromosome aneuploidy detection in lymphocytes of women of different
ages has been performed. Our results indicate that not only the Xi bu
t also the active X chromosome is preferentially lost during aging, in
dicating that the high frequency of sex-chromosome aneuploidy in human
females cannot be explained solely by a lack of negative selection of
Xi aneuploid cells. Further applications of the proposed methodology
in genetic studies are discussed.