Y. Bleriot et al., STRUCTURE AND CONFORMATION OF MANNOAMIDINES BY NMR AND MOLECULAR MODELING - ARE THEY GOOD TRANSITION-STATE MIMICS, Journal of carbohydrate chemistry, 15(8), 1996, pp. 985-1000
The conformation of two mannose-based amidines, the N-benzylmannoamidi
ne and a pseudo (1-->6) dimannoside, has been evaluated using semi-emp
irical AM1 calculations and H-1 NMR studies. The most stable conformat
ions of the mannoamidine ring correspond to the half-chair forms H-3(4
) and H-4(3). The conformations (Z) or (E) about the exocyclic C-N bon
d depend on the substituents and it was shown that, in solution, the N
-benzylmannoamidine was (E)-configured whilst the pseudo (1-->6) diman
noside was (Z)-configured. Using the grid-search approach, the potenti
al energy maps of both mannoamidines were calculated as a function of
the torsion angles which define the orientation of the amidine substit
uent. Three stable conformers were identified for the N-benzylmannoami
dine and seven for the pseudo (1-->6) dimannoside. Inter-glycosidic NO
E have provided evidence for a preferred conformation of the pseudo (1
-->6) dimannoside in solution. The transition state structure of the a
lpha-phenylmannose hydrolysis was optimized using the AM1 method and c
ompared to the N-benzylmannoamidine. The developing oxocarbenium ion i
s well matched by the mannoamidine ring but the orientation of the phe
nyl group in the inhibitor differs significantly from the position of
the leaving group in the transition state. The use of sugar type amidi
nes as haptens to obtain catalytic antibodies is then discussed.