There is no organism in which transcription initiation is better under
stood than Escherichia coli. Recent studies using genetics, biochemist
ry and structure analysis have revealed how RNA polymerase interaction
s at promoters are regulated. Prominent examples include the recruitme
nt of polymerase by activators touching its alpha and sigma subunits;
which subunit is touched depends on which activator is used and where
it binds the DNA. The less-common cases centering on enhancer-dependen
t transcription use an entirely different mechanism, involving either
DNA looping or tracking.