M. Nijenhuis et Gj. Hammerling, MULTIPLE REGIONS OF THE TRANSPORTER ASSOCIATED WITH ANTIGEN-PROCESSING (TAP) CONTRIBUTE TO ITS PEPTIDE BINDING-SITE, The Journal of immunology, 157(12), 1996, pp. 5467-5477
The transporter associated with Ag processing (TAP) translocates cytos
olic peptides into the endoplasmic reticulum, where they can bind to M
HC class I molecules. TAP does not translocate all peptides with equal
efficiency, but selects peptides with regard to both their length and
their sequence and, in this manner, affects the pool of peptides avai
lable for binding to MHC class I molecules. It has been demonstrated t
hat peptide selection by TAP predominantly occurs during the first ste
p in the translocation process, namely the association of the peptide
with a binding site present on the TAP molecule. In this study, we ide
ntify four regions, two on the TAP1 and two on the TAP2 subunit, that
make major contributions to this binding site. For both TAP1 and TAP2,
the identified regions overlap with the cytosol-membrane boundaries o
f the two transmembrane segments closest to the ATP binding site. Our
data are consistent with a model in which the transmembrane segments o
f TAP form a pore in the membrane, with the peptide binding site being
formed by the cytosolic mouth of this pore.