STRUCTURE OF THE FUSARIUM-OXYSPORUM ENDOGLUCANASE-I WITH A NONHYDROLYZABLE SUBSTRATE-ANALOG - SUBSTRATE DISTORTION GIVES RISE TO THE PREFERRED AXIAL ORIENTATION FOR THE LEAVING GROUP
G. Sulzenbacher et al., STRUCTURE OF THE FUSARIUM-OXYSPORUM ENDOGLUCANASE-I WITH A NONHYDROLYZABLE SUBSTRATE-ANALOG - SUBSTRATE DISTORTION GIVES RISE TO THE PREFERRED AXIAL ORIENTATION FOR THE LEAVING GROUP, Biochemistry, 35(48), 1996, pp. 15280-15287
Endoglucanase I (EG I) is a cellulase, from glycosyl hydrolase family
7, which cleaves the beta-1,4 linkages of cellulose with overall reten
tion of configuration. The structure of the EG I from Fusarium oxyspor
um, complexed to a nonhydrolyzable thiooligosaccharide substrate analo
gue, has been determined by X-ray crystallography at a resolution of 2
.7 Angstrom utilizing the 4-fold noncrystallographic symmetry present
in the asymmetric unit. The electron density map clearly reveals the p
resence of three glucosyl units of the inhibitor, consistent with the
known number of sugar-binding subsites, located at the active site of
the enzyme in the -2, -1, and +1 subsites, i.e., actually spanning the
point of enzymatic cleavage. The pyranose ring at the point of potent
ial enzymatic cleavage is clearly distorted from the standard C-4(1) c
hair as was originally suggested for beta-retaining enzymes by Phillip
s [Ford, L. O., Johnson, L. N., Machin, P. A., Phillips, D. C., & Tija
n, T. (1974) J. Mol. Biol. 88, 349-371]. The distortion observed goes
beyond the ''sofa'' conformation observed in previous studies and resu
lts in a conformation whose salient feature is the resulting quasi-axi
al orientation for the glycosidic bond and leaving group, as predicted
by stereoelectronic theory. An almost identical conformation has rece
ntly been observed in a complex of chitobiase with its unhydrolyzed su
bstrate [Tews, I., Perrakis, A., Oppenheim, A., Dauter, Z., Wilson, K.
S., & Vorgias, C. E. (1996) Nat. Struct. Biol. 3, 638-648]. The strik
ing similarity between these two complexes extends beyond the almost i
dentical pyranose ring distortion. The overlap of the two respective s
ugars places the enzymatic nucleophile of endoglucanase I in coinciden
ce with the C2 acetamido oxygen of N-acetylglucosamine in the catalyti
c site of the chitobiase, substantiating the involvement of this group
in the catalytic mechanism of chitobiase and related chitinolytic enz
ymes. The endoglucanase I complex with the thiosaccharide substrate an
alogue clearly illustrates the potential of nonhydrolyzable sulfur-lin
ked oligosaccharides in the elucidation of substrate binding and catal
ysis by glycosyl hydrolases.