D. Sarracino et C. Richert, QUANTITATIVE MALDI-TOF MS OF OLIGONUCLEOTIDES AND A NUCLEASE ASSAY, Bioorganic & medicinal chemistry letters, 6(21), 1996, pp. 2543-2548
DNA oligomers 8 and 12 nucleotides long have been detected quantitativ
ely by MALDI-TOF mass spectrometry using longer oligonucleotides as in
ternal standards. Employing this method, the kinetics of the nuclease
degradation of the octamer were analyzed. Reactions performed in the p
resence of the ssDNA-binding peptide KWK yielded a footprint based on
fragments from both the 3'- and the 5'-terminus of the oligonucleotide
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