ANTIFREEZE proteins (AFPs) have the unique ability to adsorb to ice an
d inhibit its growth(1). Many organisms ranging from fish to bacteria
use AFPs to retard freezing or lessen the damage incurred upon freezin
g and thawing(2-6). The ice-binding mechanism of the long linear alpha
-helical type I AFPs has been attributed to their regularly spaced pol
ar residues matching the ice lattice along a pyramidal plane(7,8). In
contrast, it is not known how globular antifreeze proteins such as typ
e III AFP that lack repeating ice-binding residues bind to ice. Here w
e report the 1.25 Angstrom crystal structure of recombinant type III A
FP (QAE isoform(9)) from eel pout (Macrozoarces americanus), which rev
eals a remarkably hat amphipathic ice-binding site where five hydrogen
-bonding atoms match two ranks of oxygens on the {10 (1) over bar 0} i
ce prism plane in the [0001] direction, giving high ice binding affini
ty and specificity. This binding site, substantiated by the structures
and properties of several ice-binding site mutants, suggests that the
AFP occupies a niche in the ice surface in which it covers the basal
plane while binding to the prism face.