Neuropeptide Y (NPY 1-36) binds to Y1 and Y2 receptors with similar af
finity. No endogenous molecular form of NPY with selectivity for Y1 or
Y2 receptors has been described so far. We report the presence of an
endogenous fragment of NPY in porcine brain, NPY 3-36, which lacks the
amino-terminal dipeptide Tyr-Pro of NPY 1-36. NPY 3-36 accounts for 3
5% of NPY-like immunoreactivity in porcine brain. We have compared bin
ding of NPY 3-36 and NPY 1-36 in model systems of Y1-like (SK-N-MC cel
ls) and Y2-like receptors (CHP234 cells). NPY 3-36 and NPY 1-36 had si
milarly high affinity for Y2-like receptors on CHP234 cells, but NPY 3
-36 had a 1000-fold lower affinity than NPY 1-36 for Y1-like receptors
on SK-N-MC cells. Thus amino-terminal cleavage of NPY 1-36 generating
NPY 3-36 converts an unselective Y1/Y2 receptor ligand into a highly
Y2 selective ligand. This may be a means of fine tuning NPY biological
actions.