Using a polymerase chain reaction (PCR) amplication strategy, we ident
ified a novel protein tyrosine phosphatase (PTPase) designated Brain D
erived Phosphatase (BDP1). The full length sequence encoded an open re
ading frame of 459 amino acids with no transmembrane domain and had a
calculated molecular weight of 50 kDa. The predicted amino acid sequen
ce contained a PEST motif and accordingly, BDP1 shared the greatest ho
mology with members of the PTP-PEST family. When transiently expressed
in 293 cells BDP1 hydrolyzed p-Nitrophenylphosphate, confirming it as
a functional protein tyrosine phosphatase. Northern blot analysis ind
icated that BDP1 was expressed not only in brain, but also in colon an
d several different tumor-derived cell lines. Furthermore, BDP1 was fo
und to differentially dephosphorylate autophosphorylated tyrosine kina
ses which are known to be overexpressed in tumor tissues.