PHYLOGENETIC ANALYSIS OF HEPATITIS-D VIRUSES INDICATING A NEW GENOTYPE-I SUBGROUP AMONG AFRICAN ISOLATES

Citation
Yy. Zhang et al., PHYLOGENETIC ANALYSIS OF HEPATITIS-D VIRUSES INDICATING A NEW GENOTYPE-I SUBGROUP AMONG AFRICAN ISOLATES, Journal of clinical microbiology, 34(12), 1996, pp. 3023-3030
Citations number
39
Categorie Soggetti
Microbiology
ISSN journal
00951137
Volume
34
Issue
12
Year of publication
1996
Pages
3023 - 3030
Database
ISI
SICI code
0095-1137(1996)34:12<3023:PAOHVI>2.0.ZU;2-7
Abstract
Genetic analysis was performed on 13 hepatitis D virus (HDV) isolates from Ethiopia, Somalia, Jordan, Kuwait, Bulgaria, Moldavia, and Sweden . The complete nucleotide sequence and genomic organization are descri bed for the first time for two African HDV isolates. Phylogenetic anal ysis showed all the African isolates to be intrarelated and to form a novel group within HDV genotype I; the suggested designation for this group is IC. The genetic distance to previously described type I isola tes was about 0.15, The HDV genotype I isolates (total of 22 examined) phylogenetically formed three clusters, each of them corresponding to certain geographic regions; the ''western'' group consisted of six HD V isolates from western Europe and the United States plus one from Kuw ait; the ''eastern'' group consisted of two isolates from Moldavia and one each from Bulgaria, Nauru, mainland China, and Taiwan; and the '' African-Middle East'' group consisted of six HDV isolates from Ethiopi a and one each from Somalia, Jordan, and Lebanon.