The complete nucleotide sequence of the genome segment 5 (S5) of a Tha
i isolate of rice ragged stunt virus (RRSV) was determined, The 2682 n
ucleotide sequence contains a single long open reading frame capable o
f encoding a polypeptide with a molecular mass of similar to 91 kDa. P
olypeptides encoded by various truncated cDNAs of S5 were expressed us
ing the pGEX fusion protein vector and the highest level of fusion pro
tein was obtained from a construct encoding a hydrophilic region of S5
protein. Antibodies raised against this fusion protein recognized a m
inor polypeptide, with a molecular mass of similar to 91 kDa, that was
present in purified preparations of RRSV particles, infected insect v
ectors and infected rice plants. This indicates that RRSV S5 encodes a
minor structural protein. Comparing the RRSV S5 sequence with sequenc
es of other reoviruses did not reveal any significant sequence similar
ities.