Loss of chromosome 3p is a critical event in the pathogenesis of lung
cancer. Overlapping homozygous 3p21.3 deletions in lung cancer cell li
nes involving GNAI2 were characterized and found to involve a region o
f genomic instability. A new widely expressed Semaphorin, H.SemaIV, wa
s isolated from the GNAI2 deletion region. Reduced H.SemaIV expression
allowed identification of additional cell lines with submicroscopic o
r larger deletions of the locus which occurred in a heterogeneous mann
er. We also demonstrate the presence of a distinct 3p21.3 homozygous d
eletion region, adjacent to the DNA mismatch repair gene, hMLH1, and i
dentified deletions in direct tumors. This appears to represent one of
the first demonstrations of homozygous deletions affecting 3p in dire
ct lung tumors.