Two overlapping rat cDNAs, covering a continuous region of 1107 base p
airs, have been isolated and sequenced. The clones contain identical o
pen reading frames, encoding a 136 amino acid long polypeptide which e
xhibits 100% identity to other mammalian H3.3 histone variants. We sho
w that the inserts derive, in particular, from the H3.3B gene. We used
these inserts and an insert from an H1 degrees encoding clone, previo
usly described (6), as probes to study the accumulation of mRNAs encod
ing the corresponding histone replacement variants (namely; H1 degrees
and H3.3) during rat brain development. We found that the concentrati
on of both H1 degrees and H3.3B mRNAs decreases from the embryonal day
18 (E18) to the postnatal day 10 (P10), with inverse correlation to p
rotein accumulation.