In situ hybridization (ISH) allows the demonstration and localization
of deoxyribonucleic acid (DNA) and ribonucleic acid (RNA) in tissue se
ctions, cells and chromosomes by utilizing a specific interaction with
a labelled nucleotide probe of known composition. Although this techn
ique has been employed for many years using radiolabelled probes, the
recent development of nonisotopic labelling systems and the greatly in
creased availability of synthetic nucleic acids has allowed an enormou
s expansion in the potential applications of ISH. The technique is now
applicable to unfixed and fixed tissues, including archival material.
The use of enzyme-linked antibody techniques to detect labelled probe
s has greatly increased the sensitivity of non-isotopic ISH without a
loss of specificity. The successful use of ISH demands careful selecti
on of labelled probes, adequate tissue pretreatment to allow access of
the probe, control of the stringency of probe binding and a sensitive
reporter system, in addition to adequate controls. The accurate local
ization of nucleotides in the central nervous system (CNS) has many cu
rrent research applications in the study of gene expression in multipl
e sclerosis and other inflammatory disorders, and a wide range of neur
odegenerative disorders, viral infections and neoplasms. The technique
is of diagnostic value in viral disorders, particularly where multipl
e infections occur. The combination of non-isotopic ISH with immunocyt
ochemistry, electron microscopy and quantitative image analysis greatl
y increases its research potential, while the development of a related
method, the in situ polymerase chain reaction, offers an additional o
pportunity for further enhancing the sensitivity of this technique.