The structure of a large fragment of the p50 subunit of the human tran
scription factor NF-kappa B, bound as a homodimer to DNA, reveals that
the Rel-homology region has two beta-barrel domains that grip DNA in
the major groove. Both domains contact the DNA backbone. The amino-ter
minal specificity domain contains a recognition loop that interacts wi
th DNA bases; the carboxy-terminal dimerization domain bears the site
of I-kappa B interaction. The folds of these domains are related to im
munoglobulin-like modules. The amino-terminal domain also resembles th
e core domain of p53.