To analyze the molecular mechanism of pattern formation in the anterio
rmost regions of the zebrafish embryo, we isolated two zebrafish seque
nces, zOtx1 and zOtx2, related to the Drosophila orthodenticle (otd) a
nd two murine Otx genes. zOtx1 and zOtx2 encode predicted gene product
s which are 82% and 94% identical to the corresponding mouse proteins.
Transcripts of both zebrafish genes appear abruptly at high levels in
a triangular patch at the animal pole of the mid-gastrula, a region w
hich contains cells fated to become midbrain and forebrain. Between 9
and 14 h of development, zOtx transcripts disappear from forebrain reg
ions in a manner characteristic for each gene, and from 14 to 24 h, pa
rticular regions of the forebrain and midbrain express one or both gen
es. The posterior limit of expression of both genes in 10-30-h embryos
forms a sharp boundary at the posterior border of the midbrain. As in
the mouse, the early expression patterns of the zOtx genes are consis
tent with a role in defining mid-brain and forebrain territories. Howe
ver, there are a number of interesting differences between the forebra
in and midbrain regions which express the genes in the two species.