The nucleotide sequence of the coat protein cistron of an Austrian iso
late of grapevine fanleaf virus (GFLV-FC) from Vitis vinifera cv. Fren
ch Colombard was determined. It shows small differences at the RNA lev
el as well as at the protein level compared to the sequences of alread
y published grapevine fanleaf virus strains. The differences may be a
result of the natural variation among virus populations or a consequen
ce of selection in a special host plant. As the virus RNA sequence rep
orted here was isolated directly from its natural woody host by an imm
unocapture-PCR technique, passage of the virus through a herbaceous ho
st could be avoided and a possible bias introduced by a different host
environment was excluded. The sequence similarity of known GFLV coat
protein cistrons to the sequence described is as high as among the oth
er strains.