A modular strategy for the de-novo synthesis of four-helix bundle prot
eins has been established. The individual helices and a cyclic decapep
tide are purified to homogeneity after deprotection before they are co
upled chemo- and regioselectively in predetermined orientations. The o
rientation of the helices relative to each other as well as of the N-t
erminus is controlled by different side chain protecting groups. The n
ew protein adapts the predicted structure of the heme binding core of
the transmembrane cytochrome b to a soluble form. This protein with a
molecular mass of 14,293 with antiparallel orientation of the four hel
ices binds two heme groups in its hydrophobic interior via four histid
ines. Circular dichroism studies indicate a high helical content of th
e complex and a free energy of folding of -30.4 kJ/mol. The two heme g
roups have midpoint potentials of -106 and -170 mV, respectively. The
modular design of the de-novo protein can easily be modified and provi
des the basis for detailed physical studies of molecular parameters.