INVESTIGATION OF THE MECHANISM OF PHOSPHORIBOSYLAMINE TRANSFER FROM GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE TO GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE
J. Rudolph et J. Stubbe, INVESTIGATION OF THE MECHANISM OF PHOSPHORIBOSYLAMINE TRANSFER FROM GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE TO GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE, Biochemistry, 34(7), 1995, pp. 2241-2250
Phosphoribosylamine (PRA) is a product of glutamine phosphoribosylpyro
phosphate amido-transferase (PRPP-AT) and a substrate for glycinamide
ribonucleotide synthetase (GAR-syn), the first two enzymes in the de n
ovo purine biosynthetic pathway. PRA has a half-life of 5 s under phys
iological conditions, hydrolyzing to ribose 5-phosphate, The instabili
ty of this purine precursor brings to question how the efficiency of t
ransfer from one active site to the next is ensured: Is PRA transferre
d by free diffusion, or is it transferred directly from one enzyme to
the next through a process defined as substrate channeling? Kinetic in
vestigations of reactions containing both enzymes monitoring the appea
rance of the intermediate PRA and/or the product GAR were performed an
d compared with the predicted kinetics assuming a free diffusion mecha
nism of transfer. A significant discrepancy exists between the free di
ffusion model and the experimental data when the ratios of the two enz
ymes are varied. To accommodate this discrepancy, a direct transfer me
chanism is proposed that is facilitated by protein-protein interaction
s: Experiments to provide evidence for these stable protein-protein in
teractions including gel chromatography, fluorescence spectroscopy, ch
emical cross-linking, and affinity gel chromatography; however, have a
ll been unsuccessful. These results suggest that the requisite channel
ing interaction between PRPP-AT and GAR-syn, which is indicated by the
kinetic results, must be a transient one.