Pollen allergens interact with the human immune system and the resulti
ng IgE antibodies provide specific probes for their identification and
characterisation. In one case, grass allergenic proteins are expresse
d late in pollen development coincident with the laying down of reserv
es. Sequence similarity of allergens has indicated possible functions
for some allergens. The major birch pollen allergen shows sequence sim
ilarity with pathogenesis-related proteins, which form a secondary res
ponse in plant host-pathogen interactions and show anti-microbial acti
vity. Some allergens of unknown function are cysteine-rich proteins, w
hile some others have cysteine-rich regions; for example, the major al
lergen from rye-grass pollen, Lol p 1, has a cysteine-rich N-terminal
region, while at the C-terminal region four tryptophan residues togeth
er with tyrosine and phenylalanine residues resemble those of cellulos
e- or sugar-binding domains of other proteins. Several pollen allergen
s show sequence similarity to cell wall-associated enzymes, while othe
rs show hydrolytic enzyme activity often associated with cell walls.