THE RuvA and RuvB proteins of Escherichia coli, which are induced in r
esponse to DNA damage, are important in the formation of heteroduplex
DNA during genetic recombination and related recombinational repair pr
ocesses(1). In vitro studies show that RuvA binds Holliday junctions(2
-5) and acts as a specificity factor that targets the RuvB ATPase, a h
exameric ring protein(6,7), to the junction. Together, RuvA and RuvB p
romote branch migration, an ATP-dependent reaction that increases the
length of the heteroduplex DNA(3,8-10). Electron microscopic visualiza
tion of RuvAB now provides a new insight into the mechanism of this pr
ocess. We observe the formation of a tripartite protein complex in whi
ch RuvA binds the crossover and is sandwiched between two hexameric ri
ngs of RuvB. The Holliday junction within this complex adopts a square
-planar structure. We propose a molecular model for branch migration,
a unique feature of which is the role played by the two oppositely ori
ented RuvB ring motors.