NMR PULSE SCHEMES FOR THE SEQUENCE-SPECIFIC ASSIGNMENT OF ARGININE GUANIDINO N-15 AND H-1 CHEMICAL-SHIFTS IN PROTEINS

Citation
T. Yamazaki et al., NMR PULSE SCHEMES FOR THE SEQUENCE-SPECIFIC ASSIGNMENT OF ARGININE GUANIDINO N-15 AND H-1 CHEMICAL-SHIFTS IN PROTEINS, Journal of the American Chemical Society, 117(12), 1995, pp. 3556-3564
Citations number
44
Categorie Soggetti
Chemistry
ISSN journal
00027863
Volume
117
Issue
12
Year of publication
1995
Pages
3556 - 3564
Database
ISI
SICI code
0002-7863(1995)117:12<3556:NPSFTS>2.0.ZU;2-6
Abstract
A family of 2D NMR experiments is presented for the sequence-specific assignment of arginine guanidino H-1 and N-15 chemical shifts based on the transfer of magnetization exclusively by scalar connectivities. B ecause of the potential for significant exchange with water at the eps ilon and eta positions along the side chain of arginine residues, care has been taken to minimize saturation and dephasing of water througho ut the course of the pulse schemes. Attempts are made to minimize the effects of chemical exchange due to moderately slow rotation about the N-epsilon-C-zeta bond of arginine. The methods are demonstrated on a 1.5 mM sample of the C-terminal SH2 domain from phospholipase-C gamma 1 in complex with a 12-residue phosphotyrosyl peptide comprising its h igh-affinity binding site in the platelet-derived growth factor recept or.