R. Fagerstrom et N. Kalkkinen, CHARACTERIZATION, SUBSITE MAPPING AND PARTIAL AMINO-ACID-SEQUENCE OF GLUCOAMYLASE FROM THE FILLAMENTOUS FUNGUS TRICHODERMA-REESEI, Biotechnology and applied biochemistry, 21, 1995, pp. 223-231
The pH optimum, temperature-dependence, thermal stability, substrate s
pecificity and subsite affinities of the 66 kDa, pI 4.0 glucoamylase o
f the filamentous fungus Trichoderma reesei were determined, It had a
pH optimum of 5.5 and a temperature optimum (5 min reaction time) of 7
0 degrees C with soluble starch as substrate. Thermal-inactivation stu
dies revealed that the glucoamylase is relatively thermostable up to 6
0 degrees C. Metal ions and EDTA tested at 5 mM concentrations had no
significant effect, and beta-cyclodextrin only slightly inhibitory eff
ects, on the digestion of soluble starch. Estimated K-m and k(cat.) va
lues for soluble starch where 0.11 mg . ml(-1) and 28.5 s(-1) respecti
vely. Hydrolysis of pullulan (K-m 14 mg . ml(-1) and k(cat.) = 6.6 s(-
1)) indicated substantial activity towards 1,6-O-glucosidic bonds. Fro
m ratios of kinetic parameters of malto- and isomalto-oligosaccharides
, it was apparent that the glucoamylase showed approx. 3-fold higher s
electivity towards isomalto-oligosaccharides than most other reported
fungal glucoamylases. Substrate binding affinities were calculated fro
m kinetic data for the linear series of malto- and isomalto-oligosacch
arides. The results were in good agreement with other reported glucoam
ylases. The main difference was that subsite 1 showed a slightly negat
ive free energy of binding with malto-oligosaccharides, whereas most o
ther glucoamylases show a positive free energy at this subsite. A set
of peptides obtained from purified glucoamylase by tryptic digestion w
here sequenced. They covered approx. 17% of the total amino acid seque
nce as estimated from molecular mass on SDS/PAGE. Some of the sequence
s were tentatively aligned to known glucoamylase sequences. They showe
d about 60% identity with the extensively studied Aspergillus glucoamy
lase.