Imprinting, the differential expression of the two alleles of a gene b
ased on their parental origin, requires that the alleles be distinguis
hed or marked. A candidate for the differentiating mark is DNA methyla
tion. The maternally expressed H19 gene is hypermethylated on the inac
tive paternal allele in somatic tissues and sperm, but to serve as the
mark that designates the imprint, differential methylation must also
be present in the gametes and the pre-implantation embryo. We now show
that the pattern of differential methylation in the 5' portion of H19
is established in the gametes and a subset is maintained in the pre-i
mplanation embryo. That subset is sufficient to confer monoallelic exp
ression to the gene in blastocysts. We propose that paternal-specific
methylation of the far 5' region is the mark that distinguishes the tw
o alleles of H19.