J. Parkinson et al., SIMPLE PHYSICAL MODEL OF COLLAGEN FIBRILLOGENESIS BASED ON DIFFUSION-LIMITED AGGREGATION, Journal of Molecular Biology, 247(4), 1995, pp. 823-831
Type I collagen is a rod-like protein which self-assembles in a regula
r array to form elongated fibrils. The process of fibril formation, te
rmed fibrillogenesis, is driven by the increase in entropy associated
with loss of water from the bound monomers. A model based on diffusion
limited aggregation (DLA) was used to investigate same of the mechani
sms involved in this process. The aggregates created in the model disp
layed several features in common with collagen fibrils including an el
ongated morphology and a preference for tip growth. Analysis of these
aggregates revealed a linear relationship between mass and distance fr
om the tip, consistent with experimental observations. Intrafibrillar
fluidity was introduced into the model by using a surface diffusion te
rm. This led to the formation of aggregates with more compact morpholo
gies. These results strongly implicate the role of diffusion limited g
rowth in collagen fibril formation.