A. Peyman et al., INHIBITION OF VIRAL GROWTH BY ANTISENSE OLIGONUCLEOTIDES DIRECTED AGAINST THE IE110 AND THE UL30 MESSENGER-RNA OF HERPES-SIMPLEX VIRUS TYPE-1, Biological chemistry Hoppe-Seyler, 376(3), 1995, pp. 195-198
In the present work we elucidate that the identification of active seq
uences for a given target is one of the principle hurdles of antisense
oligonucleotide therapeutics. A number of 100 oligonucleotides direct
ed against different target genes of HSV-1 and different locations wit
hin those genes were screened for antiviral activity. To facilitate co
mparison, the same length and the same chemical modification were used
for all oligonucleotides: 20mers with two phosphorothioate linkages a
t both the 5'- and the 3'-end. No sequence-independent effects were ob
served with this type of modification. Surprisingly, only six oligonuc
leotides did show significant antiviral activity, the most active one
(# 6) being directed against the translation initiation site of IE 110
.