F. Canavesi et al., SIRE-BY-HERD INTERACTION EFFECT WHEN VARIANCES ACROSS HERDS ARE HETEROGENEOUS .1. EXPECTED GENETIC PROGRESS, Journal of animal breeding and genetics, 112(2), 1995, pp. 95-106
Six different variance structures were simulated across herds to fit a
real data structure with 197 335 lactations in 924 herds. The homogen
eity case, as well as different combinations of heterogeneous variance
s across herd-year-seasons (HYSs) were considered. A positive correlat
ion of 0.4 was assumed between average production and phenotypic stand
ard deviation within HYS. Two animal models, with and without sire-by-
herd (S x H) interaction, were compared in their ability to rank the b
est animals. The interaction term was used as a correction factor for
heterogeneity. In terms of accuracy of genetic proofs and estimated ge
netic progress, the model including the S x H interaction effect resul
ted in less accurate genetic proofs compared to a model without S x H
interaction. Decrease in accuracy was greater for sires (-0.03) than f
or cows (-0.01). The estimated genetic progress was 2-3 % lower when f
itting the interaction into the model than when not considering S x H
effects.