RESONANCE RAMAN-SPECTROSCOPIC DETECTION OF BOTH LINEAR AND BENT FE-CNFRAGMENTS FOR THE CYANIDE ADDUCTS OF CYTOCHROME-P-450 CAMPHOR AND ITSSUBSTRATE-BOUND FORMS - RELEVANCE TO THE CHARGE RELAY MECHANISM
Mc. Simianu et Jr. Kincaid, RESONANCE RAMAN-SPECTROSCOPIC DETECTION OF BOTH LINEAR AND BENT FE-CNFRAGMENTS FOR THE CYANIDE ADDUCTS OF CYTOCHROME-P-450 CAMPHOR AND ITSSUBSTRATE-BOUND FORMS - RELEVANCE TO THE CHARGE RELAY MECHANISM, Journal of the American Chemical Society, 117(16), 1995, pp. 4628-4636
The resonance Raman spectra of the cyanide adducts of cytochrome P-450
camphor in the substrate-free, camphor-bound, and adamantanone-bound
forms are reported. Careful analyses of the difference patterns obtain
ed by subtraction of various pairs of spectra of four CN- isotopomers
provide convincing evidence for the presence of two structural conform
ers: one ''essentially Linear'' and the other bent. Both conformers pe
rsist for the substrate-bound derivatives. The linear conformer exhibi
ts the nu(Fe-C) stretching mode at 413 cm(-1) and the delta(FeCN) bend
ing mode at 387 cm(-1) for the substrate-free derivative. The correspo
nding values for the camphor-bound form are 416 and 392 cm(-1), while
for the adamantanone derivative these occur at 423 and 387 cm(-1). The
bent conformer exhibits a set of vibrational parameters which is char
acterized by a ''zigzag'' isotope shift pattern for both the lower fre
quency and the higher frequency mode. For the substrate-free form, the
vibrational modes of both conformers are shown to be sensitive to (H2
O)-H-1/(H2O)-H-2 exchange, confirming that they are both hydrogen bond
ed. While in the case of the linear conformer the H-bond donor is most
likely the active site water cluster, the (presumably off-axis) donor
for the bent conformer may be either another region of the water clus
ter or the threonine-252 (or aspartate-251) residue which may be in a
position to interact with the polar CN- ligand. The vibrational freque
ncies of both conformers are sensitive to substrate binding and to the
substrate size. Furthermore, the vibrational modes of both conformers
are insensitive to (H2O)-H-1/(H2O)-H-2 exchange in the substrate-boun
d forms. While the lack of (H2O)-H-1/(H2O)-H-2 sensitivity does not ex
clude the possibility that one or both conformers are H-bounded, its a
bsence, together with the demonstrated sensitivity to substrate size,
suggests that steric factors are important in determining the geometry
of the FeCN fragment. Finally, all the experimentally derived frequen
cies and isotopic shifts are shown to be consistent with the predictio
ns of normal mode calculations for these two conformers.