A major goal in understanding eukaryotic gene regulation is to identif
y the target(s) of transcriptional activators. Efforts to date have po
inted to various candidates. Here we show that a 34-amino-acid peptide
from the carboxy terminus of GAL4 is a strong activation domain (AD)
and retains at least four proteins from a crude extract: the negative
regulator GAL80, the TATA-binding protein (TBP), and the putative coac
tivators SUG1 and ADA2. TFIIB was not retained. Concentrating on TBP,
we demonstrate in in vitro binding assays that its interaction with th
e AD is specific, direct, and salt stable up to at least 1.6 M NaCl. T
he effects of mutations in the GALA AD on transcriptional activation i
n vivo correlate with their affinities to TBP. A point mutation (L114K
) in yeast TBP, which has been shown to compromise the mutant protein
in both binding to the VP16 AD domain and activated transcription in v
itro, reduces the affinity to the GAL4 AD to the same degree as to the
VP16 AD. This suggests that these two prototypic activators make simi
lar contacts with TBP.