RNA polymerase II holoenzymes have been described that consist of RNA
polymerase II, a subset of general transcription factors, and four SRB
proteins. The SRB proteins, which were identified through a selection
for genes involved in transcription initiation by RNA polymerase IT i
n vivo, are a hallmark of the holoenzyme. We report here the isolation
and characterization of additional SRB genes. We show that the produc
ts of all nine SRB genes identified thus far are components of the RNA
polymerase II holoenzyme and are associated with a holoenzyme subcomp
lex termed the mediator of activation. The holoenzyme is capable of re
sponding to a transcriptional activator, suggesting a model in which a
ctivators function, in part, through direct interactions with the holo
enzyme. Immunoprecipitation experiments with anti-SRB5 antibodies demo
nstrate that the acidic activating domain of VP16 specifically binds t
o the holoenzyme. Furthermore, the holoenzyme and the mediator subcomp
lex bind to a VP16 affinity column. These results provide a more compl
ete description of the RNA polymerase II holoenzyme and suggest that t
his form of the transcription apparatus can be recruited to promoters
via direct interactions with activators.