The mechanism underlying trans-inactivation associated with dominant p
osition effect variegation (PEV) of the Drosophila melanogaster brown
gene has been addressed by a comparison with its D. virilis homologue.
This comparison revealed: 86% identity between conceptual translation
products of the brown gene from these two species, functional homolog
y, as the D. virilis gene rescues a D. melanogaster null brown mutatio
n, and conservation of the sequences required for trans-inactivation,
as the D. virilis gene in D. melanogaster is subject to dominant PEV.
An extended region of sequence similarity upstream of the open reading
frame is observed. As the D. virilis homologue is functionally interc
hangeable with the D. melanogaster gene, these genes must share regula
tory sequences as well as protein coding homology. These results suppo
rt a model in which trans-inactivation is mediated by a heterochromati
n-sensitive transcription factor.