We have identified a 7.5 kb transcript from the dystrophin locus which
encodes a novel 140 kDa protein (Dp140). Based on immunoblotting Dp14
0 consists of the distal rod domain and C-terminus of 427 kDa dystroph
in and is found throughout the CNS. This protein is transcribed from a
n alternative promoter in the dystrophin locus upstream to exon 45. Th
e unique 5' first exon is conserved between rat and human. The transcr
ipt has a 1 kb 5' untranslated region, and the first methionine initia
tion codon occurs in exon 51, predicting a protein of 140 kDa. Several
studies report that Duchenne dystrophy patients with deletions in the
exon 45-52 region have an increased incidence of cognitive impairment
. Such deletions would affect expression of 427 kDa dystrophin and thi
s shorter 140 kDa isoform but not the recently described smalt distal
transcripts Dp116 or Dp71, suggesting particular importance to CNS fun
ction.