EFFICIENT DIPOLE ITERATION IN POLARIZABLE CHARGED SYSTEMS USING THE CELL MULTIPOLE METHOD AND APPLICATION TO POLARIZABLE WATER

Citation
R. Kutteh et Jb. Nicholas, EFFICIENT DIPOLE ITERATION IN POLARIZABLE CHARGED SYSTEMS USING THE CELL MULTIPOLE METHOD AND APPLICATION TO POLARIZABLE WATER, Computer physics communications, 86(3), 1995, pp. 227-235
Citations number
15
Categorie Soggetti
Mathematical Method, Physical Science","Physycs, Mathematical","Computer Science Interdisciplinary Applications
ISSN journal
00104655
Volume
86
Issue
3
Year of publication
1995
Pages
227 - 235
Database
ISI
SICI code
0010-4655(1995)86:3<227:EDIIPC>2.0.ZU;2-#
Abstract
The fast multipole method (FMM) and its Cartesian version, the cell mu ltipole method (CMM),allow efficient computation of Coulomb energy and forces in molecular dynamics (MD) simulations. In another work [R. Ku tteh and J.B, Nicholas, Implementing the cell multipole method for dip olar and charged dipolar systems, Comput. Phys. Commun., this issue], we implemented CMM for efficient and accurate computation of the energ y and forces in dipolar and charged dipolar systems. While CMM provide s an efficient way of computing energy and forces in large polarizable systems, the self-consistent dipole iteration remains a computational bottleneck in simulations of these systems. In this paper, we apply C MM (single-level) to substantially reduce the single-iteration time. W e further reduce the single-iteration time using a refined CMM iterati ve algorithm. In addition, we introduce an iterative predictor scheme to reduce the number of iterations to self-consistency. We apply these algorithms to polarizable water using the polarizable SPC (PSPC) mode l. The ''refined CMM/predictor'' iterative algorithm is shown to be ac curate and extremely efficient. It removes the dipole iteration comput ational bottleneck in simulations of large polarizable systems.