The problem under consideration is how to estimate the frequency funct
ion of a system and the associated estimation error when a set of poss
ible model structures is given and then one of them is known to contai
n the true system. The ''classical'' solution to this problem is to, f
irst, use a consistent model structure selection criterion to discard
all but one single structure, second, estimate a model in this structu
re and, third, conditioned on the assumption that the chosen structure
contains the true system, compute an estimate of the estimation error
, For a finite data set, however, one cannot guarantee that the correc
t structure is chosen, and this ''structural'' uncertainty is lost in
the previously mentioned approach. In this contribution a method is de
veloped that combines the frequency function estimates and the estimat
ion errors from all possible structures into a joint estimate and esti
mation error. Hence, this approach bypasses the structure selection pr
oblem, This is accomplished by employing a Bayesian setting,Special at
tention is given to the choice of priors. With this approach it is pos
sible to benefit from a priori information about the frequency functio
n even though the model structure is unknown.