Surveys of variability at loci that condition simply inherited, phenot
ypically neutral characters can be used to investigate relationships a
mong accessions in germplasm collections. We performed a survey of iso
zyme variability among 1005 domesticated soybean [Glycine max (L.) Mer
r.] and 258 wild soybean [G. soja (L.) Siebold and Zucc.] accessions f
rom the USDA soybean germplasm collection. By using eight activity sta
ins, we detected polymorphisms conditioned by 13 isozyme loci. The ave
rage gene diversity of the Asian G. max accessions in this study was 0
.198, while that of the G. soja accessions was 0.235. The relatively h
igh variability of this set of loci made it possible to investigate re
lationships among groups of accessions from six diverse geographic reg
ions in Asia: China, India and South-Central Asia, Japan, Korea, Manch
uria-Siberia, and Southeast Asia. The G. max and G. soja accessions fe
ll into two separate groups, based both on genetic distance and canoni
cal discriminant analysis. Publicly developed soybean cultivars releas
ed for production in North America clustered with the G. max accession
s from northeast Asia. The group of accessions from India and South-Ce
ntral Asia was the G. max group most closely related to the G. soja ac
cessions and may include some primitive agronomic types. The group of
G. max accessions from Southeast Asia stood out from the other G. max
groups. This difference was due to high frequencies of the Aco3-b, Dia
l, and Enp-a alleles among accessions in Maturity Groups VII through X
. The accessions in the later maturity groups may represent a distinct
population, relative to the accessions in the earlier maturity groups
.