Rk. Konat et al., AXINASTATIN 1 OR MALAYSIATIN - PROOF OF CONSTITUTION AND 3D STRUCTUREIN SOLUTION OF A CYCLIC HEPTAPEPTIDE WITH CYTOSTATIC PROPERTIES, Liebigs Annalen, (5), 1995, pp. 765-774
Recently, a cyclic heptapeptide with cytostatic activity was isolated
from marine sources by three different groups independently. The seque
nce of the isolated peptide was ambiguous, since two different isomers
have been proposed: Asn(1)-Pro(2)-Phe(3)-Val(4)-Val(5)-Pro(6)-Val(7)-
) (1) also called axinastatin 1 resp. pseudooxinellin and -Pro(2#)-Pro
(3#)-Phe(4#)-Val(5#)-Val(6#)-Val(7#)-) (2) called malaysiatin. We synt
hesized both peptides 1 and 2 and compared their optical rotation, FAB
-MS, H-1- and C-13-NMR data with those of the native compounds. Our re
sults prove that peptide 1 has been assigned correctly, whereas the da
ta of 2 differ significantly from those of the natural peptide. Peptid
e 1 adopts two conformations (90:10 ratio) in DMSO, interconverting sl
owly on the NMR time scale. According to MD simulations, using NOEs an
d J couplings as experimental restraints, a beta VIa-turn with a cis p
eptide bond between Val(5)-Pro(6) and a beta I-turn in the Asn(1)-Val(
4) region are the characteristic secondary structural elements of the
major conformer. Its backbone conformation is very similar to the X-ra
y structure of a related peptide Asn(a)-Leu(b)-Ser(c)-Phe(d)-Leu(e)-Pr
o(f)-Val(g)-) called evolidine.