Primula scotica Hook., a rare Scottish endemic, is threatened with ext
inction due to habitat destruction. A survey of genetic variability wi
thin the species was conducted on five populations from the Orkney isl
ands and nine from the Scottish mainland. Isozyme analysis revealed va
riation between individuals at only one of 15 enzyme encoding loci exa
mined, while a survey of DNA sequence variation via RAPD analysis reve
aled no genetic diversity either within or between a subsample of four
populations surveyed. Individuals exhibited a 'fixed' heterozygous ty
pe at seven of the enzyme encoding loci, indicating that P. scotica is
of allopolyploid origin. Despite the high level of heterozygosity per
individual and the biochemical diversity that may stem from it, the s
pecies remains restricted to a very specific habitat. Implications for
the conservation of the species are considered, including the need fo
r habitat protection.