T. Naas et al., DYNAMICS OF IS-RELATED GENETIC REARRANGEMENTS IN RESTING ESCHERICHIA-COLI K-12, Molecular biology and evolution, 12(2), 1995, pp. 198-207
An analysis of restriction fragment length polymorphism (RFLP) using e
ight residential insertion sequence (IS) elements as hybridization pro
bes reveals that the genome of resting bacteria is more dynamic than i
t was long believed. Escherichia coli strains stored in agar stabs for
up to 30 yr accumulate a genetic variation which is correlated to tim
e of storage. This spontaneous mutagenesis is often IS-specific, with
particularly high activity for IS5, and thus suggests that transpositi
onal DNA rearrangements are a major cause for the observed genetic pol
ymorphism, The RFLP patterns indicate a burst of IS30 transposition to
occur occasionally. Mutation rate is estimated by two different metho
ds to roughly 10(-5) IS-related DNA rearrangements per bacterial chrom
osome per hour of storage for the eight IS elements studied. A pedigre
e derived from the RFLP data reveals that populations had evolved inde
pendently in each stab and showed no signs of convergence. Relics of a
n assumed ancestral population were still present in the stab cultures
, but the elder stabs provided mostly mutants. These results indicate
that cells placed under nutritional deprivation might have a highly pl
astic genome and suggest that such plasticity might play an adaptive r
ole.