Orthodenticle-related proteins function as regulators of head formatio
n and other developmental events in flies and mice. Here, we character
ize a cDNA clone encoding an orthodenticle-related protein from the se
a urchin Strongylocentrotus purpuratus. The cDNA, termed SpOtx, has a
highly conserved orthodenticle homeobox but otherwise diverges in sequ
ence from its fly and mouse counterparts. Orthodenticle-related protei
ns bind with high affinity to DNA containing the sequence motif TAATCC
/T. The S. purpuratus aboral ectoderm-specific Spec2a gene has several
TAATCC/T sites in its control region, and we provide evidence, using
bandshift analysis, that Spec2a may be target gene for SpOtx. Two SpOt
x transcripts accumulate during embryogenesis, an early transcript who
se level peaks at blastula stage and a late transcript accumulating to
highest concentrations at gastrula stage. SpOtx transcripts were foun
d initially in all cells of the cleaving embryo, but they gradually be
came restricted to oral ectoderm and endoderm cells. In contrast, SpOt
x protein was found in nuclei of all cells at both blastula and pluteu
s stages. Our results suggest that SpOtx plays a role in the activatio
n of the Spec2a gene and most likely has additional functions in the d
eveloping sea urchin embryo. (C) 1995 Academic Press, Inc.