The crystallographically determined structure of a soluble fragment fr
om the major envelope protein of a flavivirus reveals an unusual archi
tecture. The flat, elongated dimer extends in a direction that would b
e parallel to the viral membrane. Residues that influence binding of m
onoclonal antibodies lie on the outward-facing surface of the protein.
The clustering of mutations that affect virulence in various flavivir
uses indicates a possible receptor binding site and, together with oth
er mutational and biochemical data, suggests a picture for the fusion-
activating, conformational change triggered by low pH.