J. Vanbeek et al., THE CONTRIBUTION OF ELECTROSTATIC AND VAN-DER-WAALS INTERACTIONS TO THE STEREOSPECIFICITY OF THE REACTION CATALYZED BY LACTATE-DEHYDROGENASE, Biophysical journal, 72(2), 1997, pp. 619-626
Continuum electrostatic calculations in conjunction with molecular dyn
amics simulations have been used to investigate the source of the ster
eospecificity in the hydride transfer reaction catalyzed by lactate de
hydrogenase (LDH). These studies show that favorable electrostatic int
eractions between the carboxamide group of the reduced nicotinamide ad
enine dinucleotide coenzyme and protein residues of the active site of
LDH can account for much if not ail of the stereospecificity of the L
DH-catalyzed reaction, with A-side hydride transfer more than 10(7) ti
mes greater than B-side transfer. Unfavorable steric interactions with
in the binding complex for B-side transfer are not found.