The chicken T cell receptor CD3 epsilon gene was isolated using a dege
nerate polymerase chain reaction. The 1883 bp long cDNA encoded a tran
smembrane protein of 16.9 kDa lacking N-linked glycosylation sites. Co
mparison of the chicken and mammalian CD3 epsilon proteins revealed lo
w homology in the extracellular domain with clusters of similarities l
ocated around the N-terminal cysteine residue and proximal to the tran
smembrane region. The high conservation of the cytoplasmic domain incl
uded motifs important for signal transduction. The alignment of all CD
3 gamma, CD3 delta and CD3 epsilon proteins allowed the identification
of highly conserved residues and motifs. Southern blot analysis indic
ated the presence of a single copy CD3 epsilon gene. The expression of
the CD3 epsilon transcript was limited to T cells and natural killer
cells. A recessive mutation of the CD3 epsilon gene in the CB chicken
strain enabled the mapping of the epitope recognized by the CT3 monocl
onal antibody. This analysis of the first non-mammalian CD3 epsilon ge
ne provides novel information about evolutionary conserved structural
features and its expression in natural killer cells.